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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*01:01-B*48:01-DRB1*14:06-DQB1*03:01 | Chile Mapuche | 0.77 | 66 | 37_48_S_73_23_W |
| 2 | A*01-B*48-DRB1*14:06-DQB1*03:01 | Bolivia Quechua | 0.72 | 69 | 16_30_S_68_9_W |
| 3 | A*01-B*48-DRB1*14-DQB1*03:01 | Mexico Baja California, Tijuana | 4.00 | 25 | 32_30_N_117_2_W |
| 4 | A*02:01:01-B*48:01:01-C*08:01:01-DRB1*14:02:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 5 | A*02:01:01-B*48:01:01-C*08:03:01-DRB1*14:03:01-DQB1*03:01:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
| 6 | A*02:01-B*48:01-C*03:03-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*02:01-DPB1*13:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 7 | A*02:01-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 8 | A*02:01-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.30 | 1,376 | 38_45_N_76_6_W |
| 9 | A*02:01-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 10 | A*02:01-B*48:01-DRB1*14:02-DQB1*03:01 | Peru Titikaka Lake Uro | 3.60 | 105 | 15_50_S_69_42_W |
| 11 | A*02:01-B*48:01-DRB1*14:02-DQB1*03:01 | Peru Titikaka Lake Uros | 3.58 | 105 | 15_50_S_70_1_W |
| 12 | A*02:06-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 13 | A*02:06-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.19 | 1,376 | 38_45_N_76_6_W |
| 14 | A*02:06-B*48:01-C*08:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 15 | A*02:06-B*48:01-C*08:01-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 16 | A*02:06-B*48:03-C*08:01-DRB1*14:06-DQA1*05:01-DQB1*03:01-DPB1*11:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 17 | A*02:13-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 18 | A*02-B*48-DRB1*14:02-DQB1*03:01 | Bolivia La Paz Aymaras | 2.48 | 87 | 16_29_S_68_7_W |
| 19 | A*02-B*48-DRB1*14-DQB1*03:01 | Ecuador Amazonia Mixed Ancestry | 1.28 | 39 | 0_48_S_76_54_W |
| 20 | A*02-B*48-DRB1*14-DQB1*03:01 | Ecuador Andes Mixed Ancestry | 1.09 | 824 | 1_28_S_78_49_W |
| 21 | A*02-B*48-DRB1*14-DQB1*03:01 | Ecuador Coast Mixed Ancestry | 0.42 | 238 | 2_11_S_79_53_W |
| 22 | A*02-B*48-DRB1*14-DQB1*03:01 | Ecuador Mixed Ancestry | 0.90 | 1,173 | 0_10_S_78_28_W |
| 23 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Sonora Rural | 0.25 | 197 | 32_15_N_114_30_W |
| 24 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Chihuahua Rural | 0.42 | 236 | 27_18_N_107_53_W |
| 25 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Durango Rural | 0.15 | 326 | 26_41_N_103_44_W |
| 26 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Coahuila Rural | 0.23 | 216 | 26_59_N_102_3_W |
| 27 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Zacatecas Rural | 0.37 | 266 | 22_46_N_102_7_W |
| 28 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Michoacan Rural | 0.43 | 348 | 19_38_N_101_38_W |
| 29 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Veracruz Rural | 0.28 | 539 | 18_26_N_95_12_W |
| 30 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Mexico City Metropolitan Area Rural | 0.33 | 150 | 19_7_N_98_45_W |
| 31 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Tlaxcala Rural | 0.60 | 830 | 19_14_N_98_20_W |
| 32 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.23 | 439 | 25_37_N_100_14_W |
| 33 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla Rural | 0.54 | 833 | 19_57_N_97_38_W |
| 34 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Oaxaca Rural | 0.41 | 485 | 15_49_N_96_19_W |
| 35 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Guerrero state | 0.35 | 144 | 17_36_N_99_57_W |
| 36 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla, Puebla city | 0.30 | 1,994 | 19_2_N_98_12_W |
| 37 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Chiapas Rural | 0.41 | 121 | 16_47_N_92_41_W |
| 38 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Mexico City North | 0.73 | 751 | 19_29_N_99_7_W |
| 39 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Veracruz, Xalapa | 0.80 | 187 | 19_32_N_96_54_W |
| 40 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Veracruz, Orizaba | 1.67 | 60 | 18_51_N_97_6_W |
| 41 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Aguascalientes state | 0.53 | 95 | 22_1_N_102_21_W |
| 42 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon, Monterrey city | 0.44 | 226 | 25_41_N_100_18_W |
| 43 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Michoacan, Morelia | 0.66 | 150 | 19_42_N_101_11_W |
| 44 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Jalisco, Guadalajara city | 0.17 | 1,189 | 20_39_N_103_20_W |
| 45 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Nayarit, Tepic | 1.03 | 97 | 21_30_N_104_53_W |
| 46 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Zacatecas, Zacatecas city | 0.60 | 84 | 22_46_N_102_34_W |
| 47 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Coahuila, Torreon | 0.25 | 396 | 25_32_N_103_24_W |
| 48 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Chihuahua, Ciudad Juarez | 0.93 | 106 | 31_41_N_106_25_W |
| 49 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Baja California, La Paz | 0.67 | 75 | 24_8_N_110_18_W |
| 50 | A*02-B*48-DRB1*14-DQB1*03:01 | Mexico Baja Californa, Mexicali | 2.00 | 100 | 32_37_N_115_27_W |
| 51 | A*03:01:02-B*48:01:01-C*08:01:01-DRB1*14:02:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 52 | A*03-B*48-DRB1*14:02-DQB1*03:01 | Bolivia La Paz Aymaras | 0.58 | 87 | 16_29_S_68_7_W |
| 53 | A*11:01-B*48:01-C*08:03-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 54 | A*24:02-B*48:01-C*03:03-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 55 | A*24:02-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.08 | 1,463 | 4_39_N_73_52_W |
| 56 | A*24:02-B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 1.35 | 1,376 | 38_45_N_76_6_W |
| 57 | A*24:02-B*48:01-C*08:03-DRB1*14:02-DQB1*03:01 | USA NMDP Alaska Native or Aleut | 0.18 | 1,376 | 38_45_N_76_6_W |
| 58 | A*24:02-B*48:01-C*08:03-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 59 | A*24:02-B*48:01-DRB1*14:02-DQB1*03:01 | USA Alaska Yupik | 1.90 | 252 | 60_48_N_161_26_W |
| 60 | A*24:02-B*48:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 61 | A*24:02-B*48:02-C*04:01-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.17 | 1,463 | 4_39_N_73_52_W |
| 62 | A*24:02-B*48:03-C*08:01-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 63 | A*24-B*48-DRB1*14:02-DQB1*03:01 | Bolivia Quechua | 1.45 | 69 | 16_30_S_68_9_W |
| 64 | A*24-B*48-DRB1*14-DQB1*03:01 | Ecuador Andes Mixed Ancestry | 0.42 | 824 | 1_28_S_78_49_W |
| 65 | A*24-B*48-DRB1*14-DQB1*03:01 | Ecuador Mixed Ancestry | 0.38 | 1,173 | 0_10_S_78_28_W |
| 66 | A*24-B*48-DRB1*14-DQB1*03:01 | Ecuador Coast Mixed Ancestry | 0.21 | 238 | 2_11_S_79_53_W |
| 67 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Michoacan Rural | 0.14 | 348 | 19_38_N_101_38_W |
| 68 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.23 | 439 | 25_37_N_100_14_W |
| 69 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Tlaxcala Rural | 0.06 | 830 | 19_14_N_98_20_W |
| 70 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla, Puebla city | 0.20 | 1,994 | 19_2_N_98_12_W |
| 71 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Oaxaca Rural | 0.31 | 485 | 15_49_N_96_19_W |
| 72 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Zacatecas, Fresnillo | 0.48 | 103 | 23_10_N_102_52_W |
| 73 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Guanajuato, Leon | 0.64 | 78 | 21_7_N_101_41_W |
| 74 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Mexico City East | 0.63 | 79 | 19_17_N_99_2_W |
| 75 | A*24-B*48-DRB1*14-DQB1*03:01 | Mexico Hidalgo, Pachuca | 1.22 | 41 | 20_6_N_98_45_W |
| 76 | A*31:01-B*48:01-C*08:03-DRB1*14:02-DQB1*03:01 | Colombia Bogotá Cord Blood | 0.07 | 1,463 | 4_39_N_73_52_W |
| 77 | A*31:01-B*48:01-C*08:03-DRB1*14:02-DQB1*03:01 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 78 | A*31:01-B*48:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.30 | 330 | 19_25_N_99_8_W |
| 79 | A*31:01-B*48:13-C*03:04-DRB1*14:06-DQA1*05:01-DQB1*03:01-DPB1*02:01 | USA San Diego | 0.26 | 496 | 32_50_N_117_15_W |
| 80 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon, Monterrey city | 1.99 | 226 | 25_41_N_100_18_W |
| 81 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Jalisco, Tlaquepaque | 1.28 | 39 | 20_37_N_103_19_W |
| 82 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Oaxaca Rural | 0.31 | 485 | 15_49_N_96_19_W |
| 83 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla Rural | 0.18 | 833 | 19_57_N_97_38_W |
| 84 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla, Puebla city | 0.13 | 1,994 | 19_2_N_98_12_W |
| 85 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Veracruz, Coatzacoalcos | 0.89 | 55 | 18_8_N_94_27_W |
| 86 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Tamaulipas, Ciudad Victoria | 2.17 | 23 | 23_44_N_99_8_W |
| 87 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Guanajuato Rural | 0.31 | 162 | 20_54_N_100_44_W |
| 88 | A*31-B*48-DRB1*14-DQB1*03:01 | Mexico Zacatecas Rural | 0.19 | 266 | 22_46_N_102_7_W |
| 89 | A*68:01:01-B*48:01:01-C*08:01:01-DRB1*14:06:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 90 | A*68-B*48-DRB1*14-DQB1*03:01 | Ecuador Mixed Ancestry | 0.13 | 1,173 | 0_10_S_78_28_W |
| 91 | A*68-B*48-DRB1*14-DQB1*03:01 | Ecuador Andes Mixed Ancestry | 0.12 | 824 | 1_28_S_78_49_W |
| 92 | A*68-B*48-DRB1*14-DQB1*03:01 | Ecuador Coast Mixed Ancestry | 0.21 | 238 | 2_11_S_79_53_W |
| 93 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Chihuahua Rural | 0.42 | 236 | 27_18_N_107_53_W |
| 94 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Michoacan Rural | 0.14 | 348 | 19_38_N_101_38_W |
| 95 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Zacatecas Rural | 0.19 | 266 | 22_46_N_102_7_W |
| 96 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Nuevo Leon Rural | 0.23 | 439 | 25_37_N_100_14_W |
| 97 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Tlaxcala Rural | 0.12 | 830 | 19_14_N_98_20_W |
| 98 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Mexico City North | 0.13 | 751 | 19_29_N_99_7_W |
| 99 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Mexico City East | 1.25 | 79 | 19_17_N_99_2_W |
| 100 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Yucatan, Merida | 0.26 | 192 | 20_58_N_89_35_W |
| 101 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Oaxaca, Oaxaca city | 0.33 | 151 | 17_4_N_96_43_W |
| 102 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla, Puebla city | 0.05 | 1,994 | 19_2_N_98_12_W |
| 103 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Tlaxcala, Tlaxcala city | 0.28 | 181 | 19_18_N_98_14_W |
| 104 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Puebla Rural | 0.12 | 833 | 19_57_N_97_38_W |
| 105 | A*68-B*48-DRB1*14-DQB1*03:01 | Mexico Jalisco, Guadalajara city | 0.04 | 1,189 | 20_39_N_103_20_W |
| 106 | A*69-B*48-DRB1*14:02-DQB1*03:01 | Bolivia Quechua | 0.72 | 69 | 16_30_S_68_9_W |
| 107 | B*48:01-C*08:01-DRB1*14:02-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
| 108 | B*48:01-C*08:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.35 | 143 | 19_25_N_99_7_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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